USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: PSMD9_HUMAN USC-OGP 2-DE database:  PSMD9_HUMAN PSMD9_HUMAN General information about the entry View entry in simple text format Entry name PSMD9_HUMAN Primary accession number O00233 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=26S proteasome non-ATPase regulatory subunit 9; AltName: Full=26S proteasome regulatory subunit p27;. Gene name Name=PSMD9 Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein PLATELET_4-7 {PLATELET 4-7} Homo sapiens (Human)   map experimental info   PLATELET_4-7 MAP LOCATIONS: SPOT OGP-0499: pI=6.32; Mw=28351 UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1286: pI=6.01; Mw=25688 Cross-references UniProtKB/Swiss-Prot O00233; PSMD9_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name PSMD9_HUMAN Primary accession number O00233 Secondary accession number(s) B2RD35 G3V1Q6 Q9BQ42 Sequence was last modified on  January 11, 2011 (version 3) Annotations were last modified on  March 15, 2017 (version 164) Name and origin of the protein Description RecName: Full=26S proteasome non-ATPase regulatory subunit 9; AltName: Full=26S proteasome regulatory subunit p27; Gene name Name=PSMD9 Encoded on Name=PSMD9 Keywords Alternative splicing; Chaperone; Complete proteome; Phosphoprotein; Polymorphism; Reference proteome. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL AB003177; BAA19790.1; -; mRNA EMBL AK315389; BAG37782.1; -; mRNA EMBL CB111716; -; NOT_ANNOTATED_CDS; mRNA EMBL AC069503; -; NOT_ANNOTATED_CDS; Genomic_DNA EMBL CH471054; EAW98296.1; -; Genomic_DNA EMBL BC002383; AAH02383.1; -; mRNA EMBL BC004184; AAH04184.1; -; mRNA EMBL BC004213; AAH04213.1; -; mRNA CCDS CCDS58284.1; -. [O00233-3]; . CCDS CCDS9225.1; -. [O00233-1]; . RefSeq NP_001248329.1; NM_001261400.2. [O00233-3]; . RefSeq NP_002804.2; NM_002813.6. [O00233-1]; . UniGene Hs.131151; -; . ProteinModelPortal O00233; -; . SMR O00233; -; . BioGrid 111687; 67; . IntAct O00233; 17; . MINT MINT-1435362; -; . STRING 9606.ENSP00000440485; -; . iPTMnet O00233; -; . PhosphoSitePlus O00233; -; . BioMuta PSMD9; -; . OGP O00233; -; . EPD O00233; -; . MaxQB O00233; -; . PaxDb O00233; -; . PeptideAtlas O00233; -; . PRIDE O00233; -; . TopDownProteomics O00233-1; -. [O00233-1]; . DNASU 5715; -; . Ensembl ENST00000537407; ENSP00000445058; ENSG00000110801. [O00233-2]; . Ensembl ENST00000541212; ENSP00000440485; ENSG00000110801. [O00233-1]; . Ensembl ENST00000542602; ENSP00000443772; ENSG00000110801. [O00233-3]; . GeneID 5715; -; . KEGG hsa:5715; -; . UCSC uc001ubl.5; human. [O00233-1]; . CTD 5715; -; . DisGeNET 5715; -; . GeneCards PSMD9; -; . HGNC HGNC:9567; PSMD9; . HPA HPA040512; -; . HPA HPA044220; -; . MIM 603146; gene; . neXtProt NX_O00233; -; . OpenTargets ENSG00000110801; -; . PharmGKB PA33913; -; . eggNOG KOG3129; Eukaryota; . eggNOG COG0265; LUCA; . GeneTree ENSGT00390000004147; -; . HOGENOM HOG000216665; -; . HOVERGEN HBG001851; -; . InParanoid O00233; -; . KO K06693; -; . OMA LGCNIVP; -; . OrthoDB EOG091G0N53; -; . PhylomeDB O00233; -; . TreeFam TF105995; -; . Reactome R-HSA-1169091; Activation of NF-kappaB in B cells; . Reactome R-HSA-1234176; Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha; . Reactome R-HSA-1236974; ER-Phagosome pathway; . Reactome R-HSA-1236978; Cross-presentation of soluble exogenous antigens (endosomes); . Reactome R-HSA-174084; Autodegradation of Cdh1 by Cdh1:APC/C; . Reactome R-HSA-174113; SCF-beta-TrCP mediated degradation of Emi1; . Reactome R-HSA-174154; APC/C:Cdc20 mediated degradation of Securin; . Reactome R-HSA-174178; APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1; . Reactome R-HSA-174184; Cdc20:Phospho-APC/C mediated degradation of Cyclin A; . Reactome R-HSA-180534; Vpu mediated degradation of CD4; . Reactome R-HSA-180585; Vif-mediated degradation of APOBEC3G; . Reactome R-HSA-187577; SCF(Skp2)-mediated degradation of p27/p21; . Reactome R-HSA-195253; Degradation of beta-catenin by the destruction complex; . Reactome R-HSA-202424; Downstream TCR signaling; . Reactome R-HSA-211733; Regulation of activated PAK-2p34 by proteasome mediated degradation; . Reactome R-HSA-2467813; Separation of Sister Chromatids; . Reactome R-HSA-2871837; FCERI mediated NF-kB activation; . Reactome R-HSA-349425; Autodegradation of the E3 ubiquitin ligase COP1; . Reactome R-HSA-350562; Regulation of ornithine decarboxylase (ODC); . Reactome R-HSA-382556; ABC-family proteins mediated transport; . Reactome R-HSA-450408; AUF1 (hnRNP D0) binds and destabilizes mRNA; . Reactome R-HSA-4608870; Asymmetric localization of PCP proteins; . Reactome R-HSA-4641257; Degradation of AXIN; . Reactome R-HSA-4641258; Degradation of DVL; . Reactome R-HSA-5358346; Hedgehog ligand biogenesis; . Reactome R-HSA-5362768; Hh mutants that don't undergo autocatalytic processing are degraded by ERAD; . Reactome R-HSA-5607761; Dectin-1 mediated noncanonical NF-kB signaling; . Reactome R-HSA-5607764; CLEC7A (Dectin-1) signaling; . Reactome R-HSA-5610780; Degradation of GLI1 by the proteasome; . Reactome R-HSA-5610783; Degradation of GLI2 by the proteasome; . Reactome R-HSA-5610785; GLI3 is processed to GLI3R by the proteasome; . Reactome R-HSA-5632684; Hedgehog 'on' state; . Reactome R-HSA-5658442; Regulation of RAS by GAPs; . Reactome R-HSA-5668541; TNFR2 non-canonical NF-kB pathway; . Reactome R-HSA-5676590; NIK-->noncanonical NF-kB signaling; . Reactome R-HSA-5678895; Defective CFTR causes cystic fibrosis; . Reactome R-HSA-5687128; MAPK6/MAPK4 signaling; . Reactome R-HSA-5689603; UCH proteinases; . Reactome R-HSA-5689880; Ub-specific processing proteases; . Reactome R-HSA-68827; CDT1 association with the CDC6:ORC:origin complex; . Reactome R-HSA-68949; Orc1 removal from chromatin; . Reactome R-HSA-69017; CDK-mediated phosphorylation and removal of Cdc6; . Reactome R-HSA-69229; Ubiquitin-dependent degradation of Cyclin D1; . Reactome R-HSA-69481; G2/M Checkpoints; . Reactome R-HSA-69601; Ubiquitin Mediated Degradation of Phosphorylated Cdc25A; . Reactome R-HSA-8852276; The role of GTSE1 in G2/M progression after G2 checkpoint; . Reactome R-HSA-8854050; FBXL7 down-regulates AURKA during mitotic entry and in early mitosis; . Reactome R-HSA-983168; Antigen processing: Ubiquitination & Proteasome degradation; . GeneWiki PSMD9; -; . GenomeRNAi 5715; -; . PRO PR:O00233; -; . Proteomes UP000005640; Chromosome 12; . Bgee ENSG00000110801; -; . CleanEx HS_PSMD9; -; . ExpressionAtlas O00233; baseline and differential; . Genevisible O00233; HS; . GO GO:0005737; C:cytoplasm; IBA:GO_Central; . GO GO:0005829; C:cytosol; TAS:Reactome; . GO GO:0005654; C:nucleoplasm; TAS:Reactome; . GO GO:0005634; C:nucleus; ISS:BHF-UCL; . GO GO:0005838; C:proteasome regulatory particle; NAS:UniProtKB; . GO GO:0043425; F:bHLH transcription factor binding; ISS:BHF-UCL; . GO GO:0003713; F:transcription coactivator activity; ISS:BHF-UCL; . GO GO:0031145; P:anaphase-promoting complex-dependent catabolic process; TAS:Reactome; . GO GO:0002479; P:antigen processing and presentation of exogenous peptide antigen via MHC class I; TAP-dependent; TAS:Reactome GO GO:0038095; P:Fc-epsilon receptor signaling pathway; TAS:Reactome; . GO GO:0000165; P:MAPK cascade; TAS:Reactome; . GO GO:0090090; P:negative regulation of canonical Wnt signaling pathway; TAS:Reactome; . GO GO:0010972; P:negative regulation of G2/M transition of mitotic cell cycle; TAS:Reactome; . GO GO:0046676; P:negative regulation of insulin secretion; ISS:BHF-UCL; . GO GO:0051436; P:negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle; TAS:Reactome; . GO GO:0038061; P:NIK/NF-kappaB signaling; TAS:Reactome; . GO GO:0090263; P:positive regulation of canonical Wnt signaling pathway; TAS:Reactome; . GO GO:0032024; P:positive regulation of insulin secretion; ISS:BHF-UCL; . GO GO:0045893; P:positive regulation of transcription; DNA-templated; ISS:BHF-UCL GO GO:0051437; P:positive regulation of ubiquitin-protein ligase activity involved in regulation of mitotic cell cycle transition; TAS:Reactome; . GO GO:0070682; P:proteasome regulatory particle assembly; IMP:UniProtKB; . GO GO:0043161; P:proteasome-mediated ubiquitin-dependent protein catabolic process; TAS:Reactome; . GO GO:0016579; P:protein deubiquitination; TAS:Reactome; . GO GO:0000209; P:protein polyubiquitination; TAS:Reactome; . GO GO:0006521; P:regulation of cellular amino acid metabolic process; TAS:Reactome; . GO GO:0043488; P:regulation of mRNA stability; TAS:Reactome; . GO GO:0061418; P:regulation of transcription from RNA polymerase II promoter in response to hypoxia; TAS:Reactome; . GO GO:0031146; P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; TAS:Reactome; . GO GO:0002223; P:stimulatory C-type lectin receptor signaling pathway; TAS:Reactome; . GO GO:0050852; P:T cell receptor signaling pathway; TAS:Reactome; . GO GO:0055085; P:transmembrane transport; TAS:Reactome; . GO GO:0033209; P:tumor necrosis factor-mediated signaling pathway; TAS:Reactome; . GO GO:0006511; P:ubiquitin-dependent protein catabolic process; NAS:UniProtKB; . GO GO:0060071; P:Wnt signaling pathway; planar cell polarity pathway; TAS:Reactome Gene3D 2.30.42.10; -; 1; . InterPro IPR001478; PDZ; . Pfam PF13180; PDZ_2; 1; . SMART SM00228; PDZ; 1; . SUPFAM SSF50156; SSF50156; 1; .

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